Remove Shiny app and associated Docker configuration
This commit is contained in:
parent
b35394c569
commit
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@ -11,22 +11,3 @@ services:
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volumes:
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- ./:/app
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- ./config.yaml:/app/config.yaml:ro
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melesicu_shiny:
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build: ./shiny-app
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container_name: melesicu_shiny
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restart: unless-stopped
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environment:
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PG_DSN: ${PG_DSN}
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S3_BUCKET: ${S3_BUCKET}
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ENTRANCE_PREFIX: "icu/entrance/"
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PROCESSED_PREFIX: "icu/processed/"
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THUMB_PREFIX: "icu/thumbnails/"
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INVENTORY_TABLE: "cam_inventory"
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DEPLOYMENT_TABLE: "cam_deployments"
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AWS_ACCESS_KEY_ID: ${S3_ACCESS_KEY}
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AWS_SECRET_ACCESS_KEY: ${S3_SECRET_KEY}
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AWS_DEFAULT_REGION: "us-east-1"
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AWS_S3_ENDPOINT: ${S3_ENDPOINT}
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AWS_S3_ENDPOINT_URL: ${S3_ENDPOINT}
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ports:
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- "3838:3838"
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@ -1,22 +0,0 @@
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FROM rocker/shiny:latest
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RUN apt-get update && apt-get install -y --no-install-recommends \
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libpq-dev \
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libcurl4-openssl-dev \
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libssl-dev \
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libxml2-dev \
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curl \
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unzip \
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&& rm -rf /var/lib/apt/lists/*
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RUN curl "https://awscli.amazonaws.com/awscli-exe-linux-x86_64.zip" -o "awscliv2.zip" \
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&& unzip awscliv2.zip \
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&& ./aws/install \
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&& rm -rf awscliv2.zip aws
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RUN R -e "install.packages(c('DBI','RPostgres','dplyr','DT','glue','shiny'), repos='https://cloud.r-project.org')"
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WORKDIR /srv/shiny-server
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COPY app.R /srv/shiny-server/app.R
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EXPOSE 3838
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517
shiny-app/app.R
517
shiny-app/app.R
@ -1,517 +0,0 @@
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library(shiny)
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library(DBI)
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library(RPostgres)
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library(dplyr)
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library(DT)
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library(glue)
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pg_dsn <- Sys.getenv("PG_DSN", "")
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s3_bucket <- Sys.getenv("S3_BUCKET", "")
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s3_endpoint <- Sys.getenv("S3_ENDPOINT", Sys.getenv("AWS_S3_ENDPOINT", Sys.getenv("AWS_S3_ENDPOINT_URL", "")))
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aws_access_key <- Sys.getenv("S3_ACCESS_KEY", Sys.getenv("AWS_ACCESS_KEY_ID", ""))
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aws_secret_key <- Sys.getenv("S3_SECRET_KEY", Sys.getenv("AWS_SECRET_ACCESS_KEY", ""))
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aws_cli <- Sys.getenv("AWS_CLI", "aws")
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thumb_prefix <- Sys.getenv("THUMB_PREFIX", "icu/thumbnails/")
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processed_prefix <- Sys.getenv("PROCESSED_PREFIX", "icu/processed/")
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entrance_prefix <- Sys.getenv("ENTRANCE_PREFIX", "icu/entrance/")
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processed_prefix <- Sys.getenv("PROCESSED_PREFIX", "icu/processed/")
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thumb_prefix <- Sys.getenv("THUMB_PREFIX", "icu/thumbnails/")
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inventory_table <- Sys.getenv("INVENTORY_TABLE", "")
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deployment_table <- Sys.getenv("DEPLOYMENT_TABLE", "")
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if (pg_dsn == "") {
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stop("PG_DSN env var is required")
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}
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if (s3_bucket == "") {
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stop("S3_BUCKET env var is required")
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}
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if (s3_endpoint == "") {
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stop("S3_ENDPOINT/AWS_S3_ENDPOINT env var is required")
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}
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if (aws_access_key == "" || aws_secret_key == "") {
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stop("S3_ACCESS_KEY/S3_SECRET_KEY or AWS_ACCESS_KEY_ID/AWS_SECRET_ACCESS_KEY required")
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}
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Sys.setenv(
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AWS_ACCESS_KEY_ID = aws_access_key,
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AWS_SECRET_ACCESS_KEY = aws_secret_key,
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AWS_EC2_METADATA_DISABLED = "true"
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)
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parse_pg_dsn <- function(dsn) {
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if (grepl("^postgresql://", dsn)) {
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m <- regexec("^postgresql://([^:]+):([^@]+)@([^:/]+):?(\\d+)?/(.+)$", dsn)
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r <- regmatches(dsn, m)[[1]]
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if (length(r) == 0) stop("Invalid PG_DSN URL format")
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return(list(
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user = r[2],
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password = r[3],
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host = r[4],
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port = ifelse(r[5] == "", 5432, as.integer(r[5])),
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dbname = r[6]
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))
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}
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if (grepl("host=", dsn)) {
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parts <- strsplit(dsn, "\\s+")[[1]]
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kv <- lapply(parts, function(p) strsplit(p, "=", fixed = TRUE)[[1]])
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vals <- setNames(lapply(kv, `[`, 2), lapply(kv, `[`, 1))
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return(list(
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user = vals$user,
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password = vals$password,
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host = vals$host,
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port = as.integer(vals$port),
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dbname = vals$dbname
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))
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}
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return(list(dbname = dsn))
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}
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pg <- parse_pg_dsn(pg_dsn)
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pg_con <- do.call(dbConnect, c(list(RPostgres::Postgres()), pg))
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onStop(function() dbDisconnect(pg_con))
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table_exists <- function(con, table_name) {
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res <- dbGetQuery(con, "SELECT to_regclass($1) AS t", params = list(table_name))
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!is.na(res$t[1])
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}
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fetch_cameras <- function() {
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if (inventory_table != "" && table_exists(pg_con, inventory_table)) {
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q <- glue("SELECT DISTINCT cam_id FROM {inventory_table} ORDER BY 1")
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return(dbGetQuery(pg_con, q)$cam_id)
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}
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character(0)
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}
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fetch_projects <- function() {
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if (deployment_table != "" && table_exists(pg_con, deployment_table)) {
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q <- glue("SELECT DISTINCT project FROM {deployment_table} ORDER BY 1")
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return(dbGetQuery(pg_con, q)$project)
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}
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character(0)
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}
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build_query <- function(from_date, to_date, camera_id, project_name, limit_rows, offset_rows, use_date_filter) {
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base <- "
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SELECT
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m.metadata_uuid,
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m.import_ts,
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m.ocr_ts,
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m.\"CustomerTimezone\",
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m.\"SignalStrength\",
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m.\"Temperature\",
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m.imei,
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m.servertime,
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ci.cam_id,
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d.project,
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c.category,
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c.score
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FROM remote_cam.metadata m
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LEFT JOIN cam_inventory ci ON ci.imei = m.imei
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LEFT JOIN LATERAL (
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SELECT d.project
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FROM cam_deployments d
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WHERE d.camera_id = ci.cam_id
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AND m.servertime >= d.deployment_start
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AND (d.deployment_end IS NULL OR m.servertime < d.deployment_end)
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ORDER BY d.deployment_start DESC NULLS LAST
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LIMIT 1
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) d ON TRUE
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LEFT JOIN LATERAL (
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SELECT category, score
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FROM remote_cam.category c
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WHERE c.image_uuid = m.metadata_uuid
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ORDER BY score DESC NULLS LAST
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LIMIT 1
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) c ON TRUE
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"
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params <- list()
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if (camera_id != "" && inventory_table != "" && table_exists(pg_con, inventory_table)) {
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base <- paste0(base, " WHERE ci.cam_id = $", length(params) + 1)
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params <- append(params, list(camera_id))
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}
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if (project_name != "" && deployment_table != "" && table_exists(pg_con, deployment_table)) {
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prefix <- if (length(params) == 0) " WHERE " else " AND "
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base <- paste0(base, prefix, " m.imei IN (SELECT ci2.imei FROM cam_inventory ci2 JOIN ",
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deployment_table, " d ON d.camera_id = ci2.cam_id WHERE d.project = $",
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length(params) + 1, ")")
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params <- append(params, list(project_name))
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}
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if (camera_id == "" && project_name == "" && !use_date_filter) {
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base <- paste0(base, " ORDER BY m.import_ts DESC LIMIT $", length(params) + 1, " OFFSET $", length(params) + 2)
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params <- append(params, list(as.integer(limit_rows), as.integer(offset_rows)))
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return(list(sql = base, params = params))
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}
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if (use_date_filter) {
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prefix <- if (length(params) == 0) " WHERE " else " AND "
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base <- paste0(base, prefix, " m.import_ts >= $", length(params) + 1, " AND m.import_ts < $", length(params) + 2)
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params <- append(params, list(from_date, to_date))
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}
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base <- paste0(base, " ORDER BY m.import_ts DESC LIMIT $", length(params) + 1, " OFFSET $", length(params) + 2)
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params <- append(params, list(as.integer(limit_rows), as.integer(offset_rows)))
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list(sql = base, params = params)
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}
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normalize_endpoint <- function(url) {
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if (url == "") return("")
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u <- url
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if (!grepl("^https?://", u)) {
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u <- paste0("https://", u)
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}
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sub("/+$", "", u)
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}
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s3_endpoint <- normalize_endpoint(s3_endpoint)
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if (aws_access_key == "" || aws_secret_key == "" || s3_endpoint == "") {
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stop("S3_ACCESS_KEY/S3_SECRET_KEY or AWS_ACCESS_KEY_ID/AWS_SECRET_ACCESS_KEY and S3_ENDPOINT are required")
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}
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normalize_endpoint <- function(url) {
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if (url == "") return("")
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u <- url
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if (!grepl("^https?://", u)) {
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u <- paste0("https://", u)
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}
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sub("/+$", "", u)
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}
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s3_endpoint <- normalize_endpoint(s3_endpoint)
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cache_dir <- Sys.getenv("THUMB_CACHE_DIR", "/tmp/thumb_cache")
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dir.create(cache_dir, recursive = TRUE, showWarnings = FALSE)
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addResourcePath("thumbs", cache_dir)
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presigned_url <- function(key, expires = 600) {
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if (is.null(key) || is.na(key) || key == "") return(NULL)
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key <- sub(paste0("^", s3_bucket, "/"), "", key)
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cmd <- sprintf(
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"\"%s\" --endpoint-url %s s3 presign s3://%s/%s --expires-in %d",
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aws_cli, s3_endpoint, s3_bucket, key, as.integer(expires)
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)
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tryCatch({
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out <- system(cmd, intern = TRUE)
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if (length(out) == 0) return(NULL)
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out[1]
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}, error = function(e) {
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message(sprintf("[DEBUG] presign error: %s", e$message))
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NULL
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})
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}
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cache_thumbnail <- function(uuid) {
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if (is.null(uuid) || is.na(uuid)) return(NULL)
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local_path <- file.path(cache_dir, paste0(uuid, ".jpg"))
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if (file.exists(local_path)) return(local_path)
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key <- paste0(thumb_prefix, uuid, ".jpg")
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cmd <- sprintf(
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"\"%s\" --endpoint-url %s s3 cp s3://%s/%s \"%s\" --only-show-errors",
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aws_cli, s3_endpoint, s3_bucket, key, local_path
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)
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tryCatch({
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system(cmd, ignore.stdout = TRUE, ignore.stderr = TRUE)
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if (file.exists(local_path)) return(local_path)
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NULL
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}, error = function(e) {
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message(sprintf("[DEBUG] cache thumb error: %s", e$message))
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NULL
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})
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}
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ui <- fluidPage(
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titlePanel("MelesICU - Image Browser"),
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tags$script(HTML("
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function melesThumbClick(el){
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var uuid = el.getAttribute('data-uuid');
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if(uuid){
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Shiny.setInputValue('thumb_click', uuid, {priority: 'event'});
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}
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}
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var melesScrollLock = false;
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window.addEventListener('scroll', function() {
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if (melesScrollLock) return;
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var nearBottom = (window.innerHeight + window.scrollY) >= (document.body.offsetHeight - 200);
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var canLoad = Shiny && Shiny.shinyapp && Shiny.shinyapp.$outputValues && Shiny.shinyapp.$outputValues.has_more_flag;
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var isLoading = Shiny && Shiny.shinyapp && Shiny.shinyapp.$outputValues && Shiny.shinyapp.$outputValues.loading_flag;
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if (nearBottom && canLoad && !isLoading) {
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melesScrollLock = true;
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Shiny.setInputValue('scroll_load', Date.now(), {priority: 'event'});
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setTimeout(function(){ melesScrollLock = false; }, 1000);
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}
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});
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")),
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sidebarLayout(
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sidebarPanel(
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dateRangeInput("date_range", "Datum", start = Sys.Date() - 7, end = Sys.Date()),
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checkboxInput("use_date_filter", "Datumsfilter aktiv", value = TRUE),
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selectInput("camera_id", "Kamera (cam_id)", choices = c("ALL", fetch_cameras()), selected = "ALL"),
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selectInput("project_name", "Projekt", choices = c("ALL", fetch_projects()), selected = "ALL"),
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numericInput("limit_rows", "Eintraege pro Seite", value = 20, min = 10, max = 2000, step = 10),
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numericInput("page", "Seite", value = 1, min = 1, step = 1),
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fluidRow(
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column(6, actionButton("prev_page", "Zurueck")),
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column(6, actionButton("next_page", "Vor"))
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),
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actionButton("apply_filters", "Filter anwenden")
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),
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mainPanel(
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tags$style(HTML("
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.spinner {
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margin: 20px 0;
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width: 32px;
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height: 32px;
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border: 4px solid #ddd;
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border-top-color: #333;
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border-radius: 50%;
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animation: spin 1s linear infinite;
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}
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@keyframes spin { to { transform: rotate(360deg); } }
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")),
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conditionalPanel("output.loading_flag", tags$div(class = "spinner")),
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uiOutput("debug_info"),
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uiOutput("thumb_grid")
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)
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)
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)
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server <- function(input, output, session) {
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rv <- reactiveValues(data = NULL, selected = NULL, loading = FALSE, has_more = TRUE, debug = NULL)
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cache_env <- new.env(parent = emptyenv())
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cache_keys <- character(0)
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url_cache_env <- new.env(parent = emptyenv())
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url_cache_keys <- character(0)
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load_data <- function() {
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from_date <- as.POSIXct(input$date_range[1], tz = "UTC")
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to_date <- as.POSIXct(input$date_range[2] + 1, tz = "UTC")
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cam <- ifelse(input$camera_id == "ALL", "", input$camera_id)
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proj <- ifelse(input$project_name == "ALL", "", input$project_name)
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page <- max(1, as.integer(input$page))
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limit <- as.integer(input$limit_rows)
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offset <- (page - 1) * limit
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key <- paste(from_date, to_date, cam, proj, input$use_date_filter, limit, offset, sep = "|")
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if (exists(key, envir = cache_env, inherits = FALSE)) {
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rv$data <- get(key, envir = cache_env, inherits = FALSE)
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return(invisible(NULL))
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}
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q <- build_query(from_date, to_date, cam, proj, limit, offset, input$use_date_filter)
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rv$loading <- TRUE
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on.exit({ rv$loading <- FALSE }, add = TRUE)
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data <- dbGetQuery(pg_con, q$sql, params = q$params)
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assign(key, data, envir = cache_env)
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cache_keys <<- c(cache_keys, key)
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if (length(cache_keys) > 20) {
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drop <- head(cache_keys, length(cache_keys) - 20)
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for (k in drop) rm(list = k, envir = cache_env)
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cache_keys <<- tail(cache_keys, 20)
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}
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rv$data <- data
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rv$has_more <- nrow(data) >= limit
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# Batch prefetch first 10 thumbnails in parallel
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if (!is.null(data) && nrow(data) > 0) {
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uuids <- head(data$metadata_uuid, 10)
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tryCatch({
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parallel::mclapply(uuids, cache_thumbnail, mc.cores = 4)
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}, error = function(e) {
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message(sprintf("[DEBUG] prefetch error: %s", e$message))
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})
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}
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if (!is.null(data) && nrow(data) > 0) {
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sample_uuid <- data$metadata_uuid[1]
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thumb_key <- paste0(thumb_prefix, sample_uuid, ".jpg")
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url <- presigned_url(thumb_key)
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rv$debug <- list(
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count = nrow(data),
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sample_uuid = sample_uuid,
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thumb_key = thumb_key,
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url = url
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)
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message(sprintf("[DEBUG] count=%d sample_uuid=%s thumb_key=%s url=%s",
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nrow(data), sample_uuid, thumb_key, ifelse(is.null(url), "NULL", url)))
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} else {
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rv$debug <- list(count = 0)
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message("[DEBUG] count=0")
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}
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}
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observeEvent(input$apply_filters, {
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if (rv$loading) {
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showNotification("Noch am Laden – bitte warten.", type = "message")
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return(NULL)
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}
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load_data()
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}, ignoreInit = TRUE)
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observeEvent(input$prev_page, {
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if (rv$loading) return(NULL)
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new_page <- max(1, as.integer(input$page) - 1)
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updateNumericInput(session, "page", value = new_page)
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load_data()
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}, ignoreInit = TRUE)
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observeEvent(input$next_page, {
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if (rv$loading) return(NULL)
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new_page <- as.integer(input$page) + 1
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updateNumericInput(session, "page", value = new_page)
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load_data()
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}, ignoreInit = TRUE)
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observeEvent(input$scroll_load, {
|
||||
if (rv$loading || !rv$has_more) return(NULL)
|
||||
new_page <- as.integer(input$page) + 1
|
||||
updateNumericInput(session, "page", value = new_page)
|
||||
load_data()
|
||||
}, ignoreInit = TRUE)
|
||||
|
||||
observeEvent(TRUE, {
|
||||
if (rv$loading) return(NULL)
|
||||
load_data()
|
||||
}, once = TRUE)
|
||||
|
||||
output$loading_flag <- reactive({ rv$loading })
|
||||
outputOptions(output, "loading_flag", suspendWhenHidden = FALSE)
|
||||
|
||||
output$has_more_flag <- reactive({ rv$has_more })
|
||||
outputOptions(output, "has_more_flag", suspendWhenHidden = FALSE)
|
||||
|
||||
format_cet <- function(ts) {
|
||||
if (is.null(ts) || is.na(ts)) return("-")
|
||||
format(as.POSIXct(ts, tz = "CET"), "%Y-%m-%d %H:%M:%S %Z")
|
||||
}
|
||||
|
||||
format_ts <- function(ts) {
|
||||
if (is.null(ts) || is.na(ts)) return("-")
|
||||
format(as.POSIXct(ts, tz = "CET"), "%Y-%m-%d %H:%M:%S %Z")
|
||||
}
|
||||
|
||||
format_diff <- function(server_ts, camera_ts) {
|
||||
if (is.null(server_ts) || is.na(server_ts) || is.null(camera_ts) || is.na(camera_ts)) return("-")
|
||||
secs <- as.numeric(difftime(server_ts, camera_ts, units = "secs"))
|
||||
sign <- ifelse(secs >= 0, "+", "-")
|
||||
secs <- abs(secs)
|
||||
hh <- floor(secs / 3600)
|
||||
mm <- floor((secs %% 3600) / 60)
|
||||
ss <- floor(secs %% 60)
|
||||
sprintf("%s%02d:%02d:%02d", sign, hh, mm, ss)
|
||||
}
|
||||
|
||||
output$thumb_grid <- renderUI({
|
||||
dat <- rv$data
|
||||
if (is.null(dat) || nrow(dat) == 0) {
|
||||
return(tags$div("Keine Ergebnisse."))
|
||||
}
|
||||
|
||||
cards <- lapply(seq_len(nrow(dat)), function(i) {
|
||||
row <- dat[i, ]
|
||||
local_path <- cache_thumbnail(row$metadata_uuid)
|
||||
if (is.null(local_path)) return(NULL)
|
||||
url <- paste0("thumbs/", basename(local_path))
|
||||
tags$div(
|
||||
style = "display:inline-block; width: 220px; margin: 6px; vertical-align: top;",
|
||||
tags$div(class = "ph", style = "width: 220px; height: 220px; background:#eee; display:block;"),
|
||||
tags$img(
|
||||
src = url,
|
||||
style = "width: 220px; height: 220px; object-fit: cover; display:block; cursor: pointer;",
|
||||
loading = "lazy",
|
||||
onload = "this.parentNode.querySelector('.ph').style.display='none';",
|
||||
`data-uuid` = row$metadata_uuid,
|
||||
onclick = "melesThumbClick(this)"
|
||||
),
|
||||
tags$div(style = "font-size: 12px; color: #222;",
|
||||
glue("CamID: {row$cam_id}")),
|
||||
tags$div(style = "font-size: 12px; color: #444;",
|
||||
glue("Serverzeit: {format_cet(row$servertime)}")),
|
||||
tags$div(style = "font-size: 12px; color: #444;",
|
||||
glue("Kamerazeit: {format_ts(row$ocr_ts)}")),
|
||||
tags$div(style = "font-size: 12px; color: #444;",
|
||||
glue("AI classification: {row$category} ({row$score})")),
|
||||
{
|
||||
delta <- format_diff(row$servertime, row$ocr_ts)
|
||||
delta_secs <- if (delta == "-") NA else as.numeric(difftime(row$servertime, row$ocr_ts, units = "secs"))
|
||||
is_warn <- !is.na(delta_secs) && abs(delta_secs) > 600
|
||||
style <- if (is_warn) "font-size: 12px; color: #c00; font-weight: bold;" else "font-size: 12px; color: #444;"
|
||||
tags$div(style = style, glue("Delta: {delta}"))
|
||||
}
|
||||
)
|
||||
})
|
||||
|
||||
tags$div(cards)
|
||||
})
|
||||
|
||||
output$debug_info <- renderUI({
|
||||
if (is.null(rv$debug)) return(NULL)
|
||||
cnt <- rv$debug$count
|
||||
if (is.null(cnt)) return(NULL)
|
||||
if (cnt == 0) {
|
||||
return(tags$div(style = "font-size:12px; color:#a00; margin-bottom:8px;",
|
||||
"Debug: 0 Treffer."))
|
||||
}
|
||||
tags$div(style = "font-size:12px; color:#555; margin-bottom:8px;",
|
||||
glue("Debug: Treffer={cnt}, Sample UUID={rv$debug$sample_uuid}"),
|
||||
tags$br(),
|
||||
glue("Thumb-Key: {rv$debug$thumb_key}"),
|
||||
tags$br(),
|
||||
if (!is.null(rv$debug$url)) tags$a(href = rv$debug$url, "Sample Thumbnail (Link)", target = "_blank") else "Sample URL: NULL")
|
||||
})
|
||||
|
||||
observeEvent(input$thumb_click, {
|
||||
uuid <- input$thumb_click
|
||||
dat <- rv$data
|
||||
if (is.null(dat)) return(NULL)
|
||||
row <- dat[dat$metadata_uuid == uuid, ]
|
||||
if (nrow(row) != 1) return(NULL)
|
||||
full_key <- paste0(processed_prefix, row$metadata_uuid, ".jpg")
|
||||
presigned_cached <- function(key, expires = 600) {
|
||||
now <- Sys.time()
|
||||
if (exists(key, envir = url_cache_env, inherits = FALSE)) {
|
||||
entry <- get(key, envir = url_cache_env, inherits = FALSE)
|
||||
if (is.list(entry) && !is.null(entry$expires_at) && now < entry$expires_at) {
|
||||
return(entry$url)
|
||||
}
|
||||
}
|
||||
u <- presigned_url(key, expires = expires)
|
||||
if (!is.null(u)) {
|
||||
assign(key, list(url = u, expires_at = now + expires - 30), envir = url_cache_env)
|
||||
url_cache_keys <<- c(url_cache_keys, key)
|
||||
if (length(url_cache_keys) > 200) {
|
||||
drop <- head(url_cache_keys, length(url_cache_keys) - 200)
|
||||
for (k in drop) rm(list = k, envir = url_cache_env)
|
||||
url_cache_keys <<- tail(url_cache_keys, 200)
|
||||
}
|
||||
}
|
||||
u
|
||||
}
|
||||
|
||||
url <- presigned_cached(full_key)
|
||||
if (is.null(url)) {
|
||||
showModal(modalDialog(
|
||||
title = glue("Bild {uuid}"),
|
||||
"Full image nicht gefunden.",
|
||||
easyClose = TRUE,
|
||||
footer = NULL
|
||||
))
|
||||
return(NULL)
|
||||
}
|
||||
showModal(modalDialog(
|
||||
title = glue("Bild {uuid}"),
|
||||
tags$img(src = url, style = "max-width: 100%; height: auto;"),
|
||||
easyClose = TRUE,
|
||||
footer = modalButton("Schließen"),
|
||||
size = "l"
|
||||
))
|
||||
})
|
||||
}
|
||||
|
||||
shinyApp(ui, server)
|
||||
Loading…
x
Reference in New Issue
Block a user